Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932673.1_cds_XP_016479120.1_70687
CDS Infomation

[gene=LOC107800464] [db_xref=GeneID:107800464] [protein=serine hydroxymethyltransferase 4-like] [protein_id=XP_016479120.1] [location=join(70848..71525,72358..72748,72842..72943,73567..73811)] [gbkey=CDS]
Sequence

ATGGATCCAGTTTCAGTTTGGGGAAACGAACCTCTCTCCGCCGTAGATCCCGAAATCCAC
GACCTAATCGAAAAGGAAAAACGCCGCCAATGCCGCGGAATCGAACTAATCGCATCGGAA
AACTTCACATCATTCGCCGTAATTGAAGCTCTCGGCAGTGCCTTAACCAACAAATACTCC
GAAGGAATTCCCGGTAACCGTTACTACGGTGGAAATGAATACATTGACATAATCGAAAAC
CTAACCAGAAGCCGTGCTTTAACGGCTTTTCATTTGGATCCAACAAAATGGGGTGTAAAT
GTTCAGCCCTATTCTGGTAGCCCAGCGAATTTCGCTGCGTACACAGCTGTTTTGAATCCA
CATGATAGGATTATGGGATTAGATTTACCATCTGGTGGGCATTTAACTCATGGTTATTAT
ACTTCTGGTGGGAAGAAAATTTCTGCTACTTCGATTTATTTTGAGAGTTTGCCATATAAG
GTGAATTCAACAAATGGATATATTGATTATGATAGGTTGGAAGAGAAGGCTTTGGATTTT
AGGCCTAAATTGATTATTTGTGGAGGTAGTGCTTATCCTAGAGATTGGGATTATAAGAGG
TTTAGAGAAATTGCTGATAAATGTGGGGCCCTTTTGCTTTGTGATATGGCTCACATTAGT
GGCCTTGTTGCTGCTCAGGAAGCTGCGGATCCCTTTGAATATTGTGACTTGGTCACTACC
ACCACTCACAAGAGCTTGAGGGGTCCAAGGGCTGGTATGATTTTCTACCGCAAGGGCCCT
AAGCCACCAAAGAAAGGCCAGCCTGAGGATGCGGTGTATGACTTCGAAGACAAGATTAAC
TTTGCTGTTTTCCCCTCGCTCCAGGGTGGTCCACACAACCACCAAATTGGTGCTCTTGCT
GTGGCCCTGAAACAGGCCGCAACTCCTGGTTTTAAGGCTTATGCTAAGCAAGTGAAGGCC
AATGCAGTTGCTCTTGGTAACTACCTCATGAGCAAAGGATACAAGCTTGTAACTGGTGGG
ACTGAGAACCACCTTGTCCTTTGGGATCTTAGACCTCTTGGTTTGACTGGTAACAAGGTT
GAGAAGCTTTGTGACCTTGCCAACATTACTGTTAACAAGAATGCTGTTTTTGGTGACAGC
AGTGCTTTGGCCCCAGGAGGTGTTCGTATTGGTACTCCTGCAATGACATCAAGGGGATTG
GTTGAGAAGGACTTCGAGCAGATTGCCGAGTTCCTCCACAGGGCTGTTACCATCACCTTG
AACATCCAGAAGGAGTACGGAAAGCTTTTGAAGGATTTCAACAAGGGTCTTGTTAATAAC
AAGGAAATTGAAGAACTCAAGGCTGACGTCGAGAAATTCTCATCCTCCTTTGACATGCCC
GGCTTCAAGTTGTCCGAGATGAAGTACAAGGACTAA

Peptide Sequence

PEP ID

XP_016479120.1
PEP Infomation

PREDICTED: serine hydroxymethyltransferase 4-like [Nicotiana tabacum]
Sequence

MDPVSVWGNEPLSAVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
EGIPGNRYYGGNEYIDIIENLTRSRALTAFHLDPTKWGVNVQPYSGSPANFAAYTAVLNP
HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSTNGYIDYDRLEEKALDF
RPKLIICGGSAYPRDWDYKRFREIADKCGALLLCDMAHISGLVAAQEAADPFEYCDLVTT
TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFAVFPSLQGGPHNHQIGALA
VALKQAATPGFKAYAKQVKANAVALGNYLMSKGYKLVTGGTENHLVLWDLRPLGLTGNKV
EKLCDLANITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEQIAEFLHRAVTITL
NIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSSSFDMPGFKLSEMKYKD

Transcript Sequence

Gene sequence data has not been registered.